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HLA » Haplotype Frequency Search
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| Line | Haplotype | Population | Frequency (%) | Sample Size | Location |
|---|---|---|---|---|---|
| 1 | A*02:01-B*51:01-DRB1*08:02 | Mexico Oaxaca Mixtec | 3.00 | 103 | 17_5_N_96_45_W |
| 2 | A*02:01-B*51:01-DRB1*08:02 | Mexico Oaxaca Jamiltepec Mixtec | 1.04 | 96 | 16_25_N_97_58_W |
| 3 | B*51:01-C*15:02-DRB1*08:02-DQB1*04:02 | Mexico Mexico City Mestizo pop 2 | 0.86 | 234 | 19_26_N_99_8_W |
| 4 | A*01:01-B*51:01-DRB1*08:02-DQB1*03:01 | Chile Mapuche | 0.77 | 66 | 37_48_S_73_23_W |
| 5 | A*03:01-B*51:01-DRB1*08:02-DQB1*04:02 | Chile Mapuche | 0.77 | 66 | 37_48_S_73_23_W |
| 6 | A*02:01:01-B*51:01:01-C*04:01:01-DRB1*08:02:01-DQB1*04:02 | Mexico Hidalgo Mezquital Valley/ Otomi | 0.69 | 72 | 20_28_N_99_13_W |
| 7 | A*02:01:01-B*51:01:01-C*08:01:01-DRB1*08:02:01-DQB1*04:02 | Mexico Hidalgo Mezquital Valley/ Otomi | 0.69 | 72 | 20_28_N_99_13_W |
| 8 | A*02:01-B*51:01-DRB1*08:02-DQB1*04:02 | Mexico Veracruz Xalapa | 0.60 | 84 | 19_32_N_96_55_W |
| 9 | A*03:01-B*51:01-DRB1*08:02-DQB1*04:02 | Mexico Veracruz Xalapa | 0.60 | 84 | 19_32_N_96_55_W |
| 10 | A*31:01-B*51:01-C*14:02-DRB1*08:02 | Japan pop 16 | 0.58 | 18,604 | 35_41_N_139_46_E |
| 11 | A*24:02-B*51:01-DRB1*08:02-DQB1*04:02 | Mexico Chihuahua Chihuahua City Pop 2 | 0.57 | 88 | 28_48_N_106_26_W |
| 12 | A*02:01-B*51:01-DRB1*08:02-DQB1*04:02 | Peru Titikaka Lake Uros | 0.50 | 105 | 15_50_S_70_1_W |
| 13 | B*51:01-C*15:09-DRB1*08:02-DQB1*04:02 | Mexico Mexico City Mestizo pop 2 | 0.43 | 234 | 19_26_N_99_8_W |
| 14 | A*02:01-B*51:01-C*15:09-DRB1*08:02-DQB1*04:02 | Mexico Mexico City Mestizo pop 2 | 0.43 | 234 | 19_26_N_99_8_W |
| 15 | A*11:01-B*51:01-C*15:02-DRB1*08:02-DQB1*04:02 | Mexico Mexico City Mestizo population | 0.35 | 143 | 19_25_N_99_7_W |
| 16 | B*51:01-C*15:02-DRB1*08:02-DQB1*04:02 | Mexico Mexico City Mestizo population | 0.35 | 143 | 19_25_N_99_7_W |
| 17 | A*02:01-B*51:01-C*05:01-DRB1*08:02 | Brazil Vale do Ribeira Quilombos | 0.35 | 144 | 24_36_S_48_15_W |
| 18 | A*31:01-B*51:01-C*14:02-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPA1*01:03-DPB1*04:02 | Japan pop 17 | 0.29 | 3,078 | 37_36_N_138_2_E |
| 19 | A*30:02-B*51:01-C*15:02-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPB1*01:01 | USA San Diego | 0.26 | 496 | 32_50_N_117_15_W |
| 20 | A*31:01-B*51:01-C*14:02-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPA1*02:02-DPB1*05:01 | Japan pop 17 | 0.23 | 3,078 | 37_36_N_138_2_E |
| 21 | A*68:01-B*51:01-C*07:02-DRB1*08:02-DQA1*03:01-DQB1*03:02-DPB1*04:02 | Nicaragua Managua | 0.22 | 339 | 12_7_N_86_10_W |
| 22 | A*03:34-B*51:01-C*16:02-DRB1*08:02-DQB1*04:02 | Malaysia Peninsular Indian | 0.18 | 271 | 3_9_N_101_57_E |
| 23 | A*02:01-B*51:01-DRB1*08:02-DQB1*04:02 | Mexico Mexico City Tlalpan | 0.15 | 330 | 19_25_N_99_8_W |
| 24 | A*02:06-B*51:01-C*08:01-DRB1*08:02-DQB1*04:02 | USA Hispanic pop 2 | 0.14 | 1,999 | 44_58_N_93_15_W |
| 25 | A*31:01-B*51:01-C*14:02-DRB1*08:02-DQB1*04:02 | USA Asian pop 2 | 0.14 | 1,772 | 44_58_N_93_15_W |
| 26 | A*24:02-B*51:01-C*14:02-DRB1*08:02 | Japan pop 16 | 0.13 | 18,604 | 35_41_N_139_46_E |
| 27 | A*03:01-B*51:01-C*15:02-DRB1*08:02 | Italy pop 5 | 0.10 | 975 | 45_28_N_9_11_E |
| 28 | A*02:13-B*51:01-C*15:02-DRB1*08:02-DQB1*04:02 | Colombia Bogotá Cord Blood | 0.08 | 1,463 | 4_39_N_73_52_W |
| 29 | A*24:02-B*51:01-C*14:02-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPA1*01:03-DPB1*04:02 | Japan pop 17 | 0.07 | 3,078 | 37_36_N_138_2_E |
| 30 | A*33:01-B*51:01-C*03:02-DRB1*08:02-DQB1*03:01 | Malaysia Peninsular Malay | 0.05 | 951 | 3_9_N_101_57_E |
| 31 | A*02:01-B*51:01-C*14:02-DRB1*08:02 | Japan pop 16 | 0.05 | 18,604 | 35_41_N_139_46_E |
| 32 | A*02:06-B*51:01-C*14:02-DRB1*08:02 | Japan pop 16 | 0.05 | 18,604 | 35_41_N_139_46_E |
| 33 | A*02:06-B*51:01-C*15:02-DRB1*08:02-DQB1*04:02 | USA Hispanic pop 2 | 0.05 | 1,999 | 44_58_N_93_15_W |
| 34 | A*02:13-B*51:01-C*15:02-DRB1*08:02-DQB1*04:02 | USA Hispanic pop 2 | 0.05 | 1,999 | 44_58_N_93_15_W |
| 35 | A*68:01-B*51:01-C*14:02-DRB1*08:02-DQB1*04:02 | USA Hispanic pop 2 | 0.05 | 1,999 | 44_58_N_93_15_W |
| 36 | A*02:06-B*51:01-C*14:02-DRB1*08:02-DQB1*03:02 | USA Asian pop 2 | 0.04 | 1,772 | 44_58_N_93_15_W |
| 37 | A*03:02-B*51:01-C*15:02-DRB1*08:02-DQB1*03:02 | USA Asian pop 2 | 0.04 | 1,772 | 44_58_N_93_15_W |
| 38 | A*02:01-B*51:01-C*14:02-DRB1*08:02 | Germany DKMS - Portugal minority | 0.04 | 1,176 | 48_31_N_9_3_E |
| 39 | A*01:01-B*51:01-C*07:02-DRB1*08:02-DQB1*04:02 | India Tamil Nadu | 0.04 | 2,492 | 11_32_N_78_52_E |
| 40 | A*31:08-B*51:01-DRB1*08:02 | Israel Argentina Jews | 0.04 | 4,307 | 32_8_N_34_52_E |
| 41 | A*11:01-B*51:01-C*14:02-DRB1*08:02 | Germany DKMS - China minority | 0.04 | 1,282 | 48_31_N_9_3_E |
| 42 | A*31:01-B*51:01-DRB1*08:02 | Hong Kong Chinese cord blood registry | 0.04 | 3,892 | 22_15_N_114_10_E |
| 43 | A*02:01-B*51:01-C*03:04-DRB1*08:02-DQB1*04:02 | Colombia Bogotá Cord Blood | 0.03 | 1,463 | 4_39_N_73_52_W |
| 44 | A*03:01-B*51:01-C*14:02-DRB1*08:02-DQB1*04:02 | Spain (Catalunya, Navarra, Extremadura, Aaragón, Cantabria, | 0.03 | 4,335 | 41_22_N_2_11_E |
| 45 | A*01:01-B*51:01-C*14:02-DRB1*08:02-DQB1*04:02 | India Tamil Nadu | 0.03 | 2,492 | 11_32_N_78_52_E |
| 46 | A*68:02-B*51:01-DRB1*08:02 | Israel Argentina Jews | 0.03 | 4,307 | 32_8_N_34_52_E |
| 47 | A*11:01-B*51:01-C*14:02-DRB1*08:02 | Japan pop 16 | 0.03 | 18,604 | 35_41_N_139_46_E |
| 48 | A*33:03-B*51:01-C*14:02-DRB1*08:02 | Japan pop 16 | 0.03 | 18,604 | 35_41_N_139_46_E |
| 49 | A*02:01-B*51:01-C*14:02-DRB1*08:02-DQA1*04:01-DQB1*04:01-DPA1*02:02-DPB1*05:01 | Japan pop 17 | 0.03 | 3,078 | 37_36_N_138_2_E |
| 50 | A*02:06-B*51:01-C*14:02-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPA1*01:03-DPB1*04:02 | Japan pop 17 | 0.03 | 3,078 | 37_36_N_138_2_E |
| 51 | A*24:02-B*51:01-C*14:02-DRB1*08:02-DQA1*04:01-DQB1*03:02-DPA1*02:02-DPB1*05:01 | Japan pop 17 | 0.03 | 3,078 | 37_36_N_138_2_E |
| 52 | A*26:03-B*51:01-C*14:02-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPA1*02:02-DPB1*05:01 | Japan pop 17 | 0.03 | 3,078 | 37_36_N_138_2_E |
| 53 | A*31:01-B*51:01-C*14:02-DRB1*08:02-DQA1*03:01-DQB1*03:02-DPA1*02:02-DPB1*05:01 | Japan pop 17 | 0.03 | 3,078 | 37_36_N_138_2_E |
| 54 | A*31:01-B*51:01-C*14:02-DRB1*08:02-DQA1*04:01-DQB1*04:01-DPA1*02:02-DPB1*05:01 | Japan pop 17 | 0.03 | 3,078 | 37_36_N_138_2_E |
| 55 | A*31:01-B*51:01-C*14:02-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPA1*01:03-DPB1*02:01 | Japan pop 17 | 0.03 | 3,078 | 37_36_N_138_2_E |
| 56 | A*31:01-B*51:01-C*14:02-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPA1*02:01-DPB1*09:01 | Japan pop 17 | 0.03 | 3,078 | 37_36_N_138_2_E |
| 57 | A*33:03-B*51:01-C*14:02-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPA1*01:03-DPB1*04:02 | Japan pop 17 | 0.03 | 3,078 | 37_36_N_138_2_E |
| 58 | A*33:03-B*51:01-C*14:02-DRB1*08:02-DQA1*04:01-DQB1*04:02-DPA1*02:01-DPB1*14:01 | Japan pop 17 | 0.03 | 3,078 | 37_36_N_138_2_E |
| 59 | A*11:01:01-B*51:01:01-C*04:82-DRB1*08:02:01-DQB1*04:02:01 | China Zhejiang Han | 0.03 | 1,734 | 27_2_N_118_1_E |
| 60 | A*24:02:01-B*51:01:01-C*14:02:01-DRB1*08:02:01-DQB1*03:01:01 | China Zhejiang Han | 0.03 | 1,734 | 27_2_N_118_1_E |
| 61 | A*74:02:01-B*51:01:01-C*14:02:01-DRB1*08:02:01-DQB1*05:02:01 | China Zhejiang Han | 0.03 | 1,734 | 27_2_N_118_1_E |
| 62 | A*11:01-B*51:01-DRB1*08:02 | Hong Kong Chinese cord blood registry | 0.02 | 3,892 | 22_15_N_114_10_E |
| 63 | A*31:01:02-B*51:01:01-C*14:02:01-DRB1*08:02:01-DPB1*05:01:01 | Hong Kong Chinese HKBMDR HLA 11 loci | 0.02 | 5,266 | 22_25_N_114_17_E |
| 64 | A*26:01-B*51:01-C*14:02-DRB1*08:02 | Japan pop 16 | 0.02 | 18,604 | 35_41_N_139_46_E |
| 65 | A*26:03-B*51:01-C*14:02-DRB1*08:02 | Japan pop 16 | 0.02 | 18,604 | 35_41_N_139_46_E |
| 66 | A*11:01-B*51:01-C*05:01-DRB1*08:02-DQB1*03:02 | India East UCBB | 0.02 | 2,403 | 22_25_N_88_18_E |
| 67 | A*02:01-B*51:01-C*07:04-DRB1*08:02-DQB1*03:01 | India Tamil Nadu | 0.02 | 2,492 | 11_32_N_78_52_E |
| 68 | A*29:01-B*51:01-C*14:02-DRB1*08:02-DQB1*04:02 | India Tamil Nadu | 0.02 | 2,492 | 11_32_N_78_52_E |
| 69 | A*02:01-B*51:01-C*14:02-DRB1*08:02-DQB1*04:02 | India South UCBB | 0.02 | 11,446 | 13_6_N_80_8_E |
| 70 | A*03:02-B*51:01-C*15:02-DRB1*08:02-DQB1*03:02 | India West UCBB | 0.02 | 5,829 | 19_11_N_73_3_E |
| 71 | A*02:01-B*51:01-C*15:02-DRB1*08:02 | Japan pop 16 | 0.02 | 18,604 | 35_41_N_139_46_E |
| 72 | A*11:01-B*51:01-C*14:02-DRB1*08:02 | Hong Kong Chinese BMDR | 0.02 | 7,595 | 22_15_N_114_10_E |
| 73 | A*02:01-B*51:01-DRB1*08:02 | Israel Argentina Jews | 0.02 | 4,307 | 32_8_N_34_52_E |
| 74 | A*31:01:02-B*51:01:01-C*14:02:01-DRB1*08:02:01-DPB1*02:01:02 | Hong Kong Chinese HKBMDR HLA 11 loci | 0.01 | 5,266 | 22_25_N_114_17_E |
| 75 | A*24:02-B*51:01-DRB1*08:02 | Hong Kong Chinese cord blood registry | 0.01 | 3,892 | 22_15_N_114_10_E |
| 76 | A*02:01-B*51:01-C*15:09-DRB1*08:02-DQB1*04:02 | USA Hispanic pop 2 | 0.01 | 1,999 | 44_58_N_93_15_W |
| 77 | A*32:01-B*51:01-C*15:09-DRB1*08:02-DQB1*04:02 | USA Hispanic pop 2 | 0.01 | 1,999 | 44_58_N_93_15_W |
| 78 | A*31:01-B*51:01-DRB1*08:02 | Israel Argentina Jews | 0.01 | 4,307 | 32_8_N_34_52_E |
| 79 | A*01:01-B*51:01-DRB1*08:02 | Israel Argentina Jews | 0.01 | 4,307 | 32_8_N_34_52_E |
| 80 | A*26:01-B*51:01-DRB1*08:02 | Israel Argentina Jews | 0.01 | 4,307 | 32_8_N_34_52_E |
| 81 | A*02:07-B*51:01-C*14:02-DRB1*08:02 | Japan pop 16 | 0.01 | 18,604 | 35_41_N_139_46_E |
| 82 | A*24:02-B*51:01-C*15:02-DRB1*08:02 | Japan pop 16 | 0.01 | 18,604 | 35_41_N_139_46_E |
| 83 | A*31:01:02-B*51:01:01-C*14:02:01-DRB1*08:02:01-DPB1*02:02:01 | Hong Kong Chinese HKBMDR HLA 11 loci | 0.01 | 5,266 | 22_25_N_114_17_E |
| 84 | A*11:01-B*51:01-C*15:02-DRB1*08:02-DQB1*03:02 | India West UCBB | 0.01 | 5,829 | 19_11_N_73_3_E |
| 85 | A*31:01-B*51:01-C*14:02-DRB1*08:02 | Hong Kong Chinese BMDR | 0.01 | 7,595 | 22_15_N_114_10_E |
| 86 | A*11:01:01-B*51:01:01-C*14:02:01-DRB1*08:02:01-DPB1*04:02:01 | Hong Kong Chinese HKBMDR HLA 11 loci | 0.01 | 5,266 | 22_25_N_114_17_E |
| 87 | A*11:01-B*51:01-C*14:02-DRB1*08:02-DQB1*04:02 | India Tamil Nadu | 0.01 | 2,492 | 11_32_N_78_52_E |
| 88 | A*02:03-B*51:01-C*14:02-DRB1*08:02 | Hong Kong Chinese BMDR | 0.01 | 7,595 | 22_15_N_114_10_E |
| 89 | A*02:01-B*51:01-C*03:03-DRB1*08:02 | Japan pop 16 | 0.01 | 18,604 | 35_41_N_139_46_E |
| 90 | A*24:02-B*51:01-C*03:04-DRB1*08:02 | Japan pop 16 | 0.01 | 18,604 | 35_41_N_139_46_E |
| 91 | A*24:20-B*51:01-C*14:02-DRB1*08:02 | Japan pop 16 | 0.01 | 18,604 | 35_41_N_139_46_E |
| 92 | A*26:01-B*51:01-C*03:04-DRB1*08:02 | Japan pop 16 | 0.01 | 18,604 | 35_41_N_139_46_E |
| 93 | A*26:02-B*51:01-C*14:02-DRB1*08:02 | Japan pop 16 | 0.01 | 18,604 | 35_41_N_139_46_E |
| 94 | A*31:01-B*51:01-C*03:04-DRB1*08:02 | Japan pop 16 | 0.01 | 18,604 | 35_41_N_139_46_E |
| 95 | A*02:06-B*51:01-C*16:02-DRB1*08:02-DQB1*04:02 | India South UCBB | 0.00 | 11,446 | 13_6_N_80_8_E |
| 96 | A*11:01-B*51:01-C*12:02-DRB1*08:02-DQB1*03:01 | India South UCBB | 0.00 | 11,446 | 13_6_N_80_8_E |
| 97 | A*26:01-B*51:01-C*14:02-DRB1*08:02-DQB1*04:02 | India South UCBB | 0.00 | 11,446 | 13_6_N_80_8_E |
| 98 | A*32:01-B*51:01-C*03:153-DRB1*08:02-DQB1*04:02 | India South UCBB | 0.00 | 11,446 | 13_6_N_80_8_E |
| 99 | A*01:01-B*51:01-C*14:02-DRB1*08:02 | Poland DKMS | 0.00 | 20,653 | 52_8_N_19_23_E |
| 100 | A*26:01-B*51:01-C*16:02-DRB1*08:02-DQB1*03:01 | India South UCBB | 0.00 | 11,446 | 13_6_N_80_8_E |
| 101 | A*31:01-B*51:01-DRB1*08:02 | Israel USSR Jews | 0.00 | 45,681 | 32_9_N_34_50_E |
| 102 | A*24:02-B*51:01-C*14:02-DRB1*08:02-DQB1*03:01 | India Tamil Nadu | 0.00 | 2,492 | 11_32_N_78_52_E |
Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.
support@allelefrequencies.net